Index A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | Q | R | S | T | U | V | W A Acoustic (class in biotuner.harmonic_geometry) all_harmonics (compute_biotuner.self attribute) alpha_partner (ResonanceConfig attribute), [1] alpha_self (ResonanceConfig attribute), [1] amplitudes (HarmonicInput attribute), [1] amps (compute_biotuner.self attribute) analyze() (math_series method) ancova_groups() (in module biotuner.stats) animate_geometry_sequence() (in module biotuner.harmonic_geometry.plotting) animate_rotation() (in module biotuner.harmonic_geometry.plotting) aperiodic_exponent (HarmonicInput attribute), [1] at() (HarmonicSequence method), [1] axis_clean() (in module biotuner.harmonic_geometry.plotting) B bandwidth_correction (ResonanceConfig attribute), [1] barycenter() (WassersteinTrajectory method) base_freq (HarmonicInput attribute), [1] beat_envelope() (in module biotuner.rhythm_construction) beat_spectrogram() (in module biotuner.rhythm_construction) best_series (math_series attribute) betti_numbers_ (HarmonicTopology property) binary_nm_kernel() (in module biotuner.resonance.kernels_ratio) binome2euclid() (in module biotuner.rhythm_construction) biotuner.biotuner_group module biotuner.biotuner_mne module biotuner.biotuner_object module biotuner.harmonic_connectivity module biotuner.harmonic_geometry module biotuner.harmonic_geometry.chladni module biotuner.harmonic_geometry.fractal module biotuner.harmonic_geometry.generative module biotuner.harmonic_geometry.geometry_3d module biotuner.harmonic_geometry.geometry_data module biotuner.harmonic_geometry.harmonograph module biotuner.harmonic_geometry.inputs module biotuner.harmonic_geometry.lissajous module biotuner.harmonic_geometry.metrics module biotuner.harmonic_geometry.plotting module biotuner.harmonic_geometry.polygon_circular module biotuner.harmonic_sequence module biotuner.harmonic_sequence_viz module biotuner.harmonic_spectrum module biotuner.math_series module biotuner.metrics module biotuner.peaks_extension module biotuner.peaks_extraction module biotuner.plot_config module biotuner.plot_utils module biotuner.resonance module biotuner.resonance.combine module biotuner.resonance.coupling module biotuner.resonance.kernels_harmonic module biotuner.resonance.kernels_ratio module biotuner.resonance.nulls module biotuner.resonance.orchestrator module biotuner.resonance.phase_estimators module biotuner.resonance.plots module biotuner.resonance.registry module biotuner.rhythm_construction module biotuner.scale_construction module biotuner.stats module biotuner.surrogates module biotuner.transitional_harmony module biotuner_mne() (in module biotuner.biotuner_mne) biotuner_style (class in biotuner.plot_config) BiotunerGroup (class in biotuner.biotuner_group) bjorklund() (in module biotuner.rhythm_construction) blend_fields() (in module biotuner.harmonic_geometry) Box3D (class in biotuner.harmonic_geometry) build_nm_plv_matrix() (in module biotuner.resonance.coupling) build_pairwise_coupling_matrix() (in module biotuner.resonance.coupling) C cepstral_peaks() (in module biotuner.peaks_extraction) cepstrum() (in module biotuner.peaks_extraction) chladni_field_3d_box() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.chladni) chladni_field_circular() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.chladni) chladni_field_polygon() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.chladni) chladni_field_rectangular() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.chladni) chladni_from_input() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.chladni) chladni_nodal_lines() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.chladni) chladni_nodal_surfaces() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.chladni) chladni_temporal() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.chladni) chord_sequence_ (HarmonicGrammar property) Circular (class in biotuner.harmonic_geometry) clear_harmonicity_cache() (in module biotuner.harmonic_sequence) ClosedSurface (class in biotuner.harmonic_geometry) coincidences_continuous() (in module biotuner.rhythm_construction) combine (ResonanceConfig attribute), [1] combine_params (ResonanceConfig attribute), [1] compare() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.metrics) compare_all_metrics() (in module biotuner.stats) compare_deltas() (transitional_harmony method) compare_groups() (BiotunerGroup method) compare_oct_div() (in module biotuner.scale_construction) compute_biotuner (class in biotuner.biotuner_object) compute_consonance() (in module biotuner.metrics) compute_cross_resonance() (in module biotuner.harmonic_connectivity) compute_cross_resonance_connectivity() (harmonic_connectivity method) compute_cross_resonance_connectivity_zscore() (harmonic_connectivity method) compute_cross_spectrum_harmonicity() (in module biotuner.harmonic_connectivity) compute_diss_curve() (BiotunerGroup method) (compute_biotuner method) compute_euler_fokker() (BiotunerGroup method) compute_extension() (BiotunerGroup method) compute_FOOOF() (in module biotuner.peaks_extraction) compute_harm_connectivity() (harmonic_connectivity method) compute_harmonic_entropy() (BiotunerGroup method) (compute_biotuner method) compute_harmonic_entropy_domain_integral() (in module biotuner.scale_construction) compute_harmonic_entropy_simple_weights() (in module biotuner.scale_construction) compute_harmonic_power() (in module biotuner.harmonic_spectrum) compute_harmonic_spectrum() (in module biotuner.harmonic_spectrum) compute_harmonic_spectrum_connectivity() (harmonic_connectivity method) compute_harmonic_tuning() (BiotunerGroup method) compute_IMF_correlation() (harmonic_connectivity method) compute_metrics() (BiotunerGroup method) compute_multitaper_psd() (in module biotuner.peaks_extraction) compute_peak_phase_coupling_connectivity() (harmonic_connectivity method) compute_peak_resonance() (compute_biotuner method) compute_peak_resonance_connectivity() (harmonic_connectivity method) compute_peaks() (BiotunerGroup method) compute_peaks_metrics() (compute_biotuner method) compute_peaks_ts() (compute_biotuner method) compute_resonance() (compute_biotuner method) (in module biotuner.resonance) (in module biotuner.resonance.orchestrator) compute_rhythmic_ratio() (in module biotuner.harmonic_connectivity) compute_sidebands() (in module biotuner.peaks_extraction) compute_spectromorph() (compute_biotuner method) compute_subharmonic_tension() (in module biotuner.metrics) compute_subharmonics() (in module biotuner.metrics) compute_subharmonics_2lists() (in module biotuner.metrics) compute_time_resolved_harm_connectivity() (harmonic_connectivity method) compute_trans_harmony() (transitional_harmony method) config (CrossResonanceResult attribute) (ResonanceResult attribute), [1] consonance_peaks() (in module biotuner.metrics) consonance_polygon() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.polygon_circular) consonant_euclid() (in module biotuner.rhythm_construction) consonant_ratios() (in module biotuner.metrics) continued_fraction_rectangles() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.fractal) convergents() (in module biotuner.scale_construction) coordinates (GeometryData attribute), [1] correlate_metrics_peaks() (in module biotuner.stats) count_theoretical_harmonic_partners() (in module biotuner.harmonic_spectrum) coupled_pairs (HigherOrderResult attribute), [1] coupling_metric (ResonanceConfig attribute), [1] coupling_metric_params (ResonanceConfig attribute), [1] create_mode() (in module biotuner.scale_construction) cross_frequency_rrci() (in module biotuner.harmonic_connectivity) cross_pc_reducer (ResonanceConfig attribute), [1] cross_use_ratio_kernel (ResonanceConfig attribute), [1] CrossResonanceResult (class in biotuner.harmonic_connectivity) Crystallization (class in biotuner.harmonic_geometry) D damping (HarmonicInput attribute), [1] decode() (HarmonicLatentSpace method) decode_viterbi() (HarmonicMarkov method) default_source() (Acoustic method) (ClosedSurface method) (Crystallization method) (Elastic method) (Faraday method) (Granular method) (Interference method) (Medium method) (PlasmaLattice method) (ReactionDiffusion method) (RigidPlate method) (Streaming method) (Tracer method) derive_damping_from_linewidth() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.harmonograph) detect_nm_coupling() (in module biotuner.resonance) detrend (ResonanceConfig attribute), [1] diss_curve() (in module biotuner.scale_construction) diss_scale (compute_biotuner.self attribute) diss_scale_cons (compute_biotuner.self attribute) dissmeasure() (in module biotuner.scale_construction) distance_matrix_ (WassersteinTrajectory property) Domain (class in biotuner.harmonic_geometry) draw_curve_2d() (in module biotuner.harmonic_geometry.plotting) draw_curve_3d() (in module biotuner.harmonic_geometry.plotting) draw_field_2d() (in module biotuner.harmonic_geometry.plotting) draw_graph_2d() (in module biotuner.harmonic_geometry.plotting) draw_hyperbolic_graph() (in module biotuner.harmonic_geometry.plotting) draw_image() (in module biotuner.harmonic_geometry.plotting) draw_mesh_3d() (in module biotuner.harmonic_geometry.plotting) draw_point_cloud_2d() (in module biotuner.harmonic_geometry.plotting) draw_point_cloud_3d() (in module biotuner.harmonic_geometry.plotting) draw_polygon() (in module biotuner.harmonic_geometry.plotting) draw_polygon_set() (in module biotuner.harmonic_geometry.plotting) draw_rectangles() (in module biotuner.harmonic_geometry.plotting) draw_tree_2d() (in module biotuner.harmonic_geometry.plotting) draw_tree_3d() (in module biotuner.harmonic_geometry.plotting) dyad_similarity() (in module biotuner.metrics) E edges (GeometryData attribute), [1] EEG_harmonics_div() (in module biotuner.peaks_extension) EEG_harmonics_mult() (in module biotuner.peaks_extension) eigenvalues_ (HarmonicDMD property) Elastic (class in biotuner.harmonic_geometry) embed() (WassersteinTrajectory method) EMD_eeg() (in module biotuner.peaks_extraction) EMD_time_resolved_harmonicity() (in module biotuner.harmonic_connectivity) encode() (HarmonicLatentSpace method) encode_harmonicity_matrices() (in module biotuner.harmonic_sequence) encode_harmonicity_spectrum() (in module biotuner.harmonic_sequence) encode_histograms() (in module biotuner.harmonic_sequence) encode_ji_matrix() (in module biotuner.harmonic_sequence) encode_scalar_metrics() (in module biotuner.harmonic_sequence) endogenous_intermodulations() (in module biotuner.peaks_extraction) epicycloid() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.polygon_circular) equave (HarmonicInput attribute), [1] euclid_long_to_short() (in module biotuner.rhythm_construction) euclid_polyrhythm_to_midi() (in module biotuner.rhythm_construction) euclid_string_to_referent() (in module biotuner.rhythm_construction) euclidean_rhythm() (in module biotuner.rhythm_construction) euler() (in module biotuner.metrics) euler_fokker (compute_biotuner.self attribute) euler_fokker_scale() (compute_biotuner method) (in module biotuner.scale_construction) evolve_density_ramp() (in module biotuner.rhythm_construction) evolve_metric_modulation() (in module biotuner.rhythm_construction) evolve_onset_interpolation() (in module biotuner.rhythm_construction) evolve_phase_shift() (in module biotuner.rhythm_construction) explained_variance_ratio_ (HarmonicLatentSpace property) extend_harmonic_fit() (in module biotuner.harmonic_geometry) extend_harmonic_tuning() (in module biotuner.harmonic_geometry) extend_harmonics() (in module biotuner.harmonic_geometry) extend_subharmonics() (in module biotuner.harmonic_geometry) extract_coincidence_rhythm() (in module biotuner.rhythm_construction) extract_tuning() (in module biotuner.harmonic_sequence) extract_welch_peaks() (in module biotuner.peaks_extraction) F faces (GeometryData attribute), [1] factor_surrogate_mean (ResonanceResult attribute), [1] factor_surrogate_std (ResonanceResult attribute), [1] factor_z (ResonanceResult attribute), [1] factors (CrossResonanceResult attribute) (ResonanceResult attribute), [1] fade_in_components() (in module biotuner.harmonic_geometry) family (Acoustic attribute) (ClosedSurface attribute) (Crystallization attribute) (Elastic attribute) (Faraday attribute) (Granular attribute) (Interference attribute) (Medium attribute) (PlasmaLattice attribute) (ReactionDiffusion attribute) (RigidPlate attribute) (Streaming attribute) (Tracer attribute) Faraday (class in biotuner.harmonic_geometry) farey() (in module biotuner.math_series) farey_sequence_layout() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.fractal) features (HarmonicSequenceAnalyzer property) features_freqs_ (HarmonicSequenceAnalyzer property) fibonacci() (in module biotuner.math_series) field_grid (GeometryData attribute), [1] find_MOS() (in module biotuner.scale_construction) find_optimal_n_states() (in module biotuner.harmonic_sequence) find_optimal_offsets() (in module biotuner.rhythm_construction) find_spectral_peaks() (in module biotuner.harmonic_spectrum) fit() (HarmonicDMD method) (HarmonicGrammar method) (HarmonicLatentSpace method) (HarmonicMarkov method) (HarmonicTopology method) (SingularSpectrumAnalysis method) (WassersteinTrajectory method) fit_all() (compute_biotuner method) (HarmonicSequenceAnalyzer method) fit_biotuner() (in module biotuner.biotuner_object) fit_dmd() (HarmonicSequenceAnalyzer method) fit_grammar() (HarmonicSequenceAnalyzer method) fit_latent() (HarmonicSequenceAnalyzer method) fit_markov() (HarmonicSequenceAnalyzer method) fit_topology() (HarmonicSequenceAnalyzer method) fit_transform() (UnivariateTransformerMixin method) fit_wasserstein() (HarmonicSequenceAnalyzer method) flux_ (WassersteinTrajectory property) fmax (ResonanceConfig attribute), [1] fmin (ResonanceConfig attribute), [1] fraction_kernel() (in module biotuner.resonance.kernels_ratio) frames (HarmonicSequence attribute), [1] frames_to_midi() (in module biotuner.rhythm_construction) FREQ_BANDS (compute_biotuner.self attribute) freqs (compute_biotuner.self attribute) (CrossResonanceResult attribute) (HarmonicInput attribute), [1] (ResonanceResult attribute), [1] frequencies_ (HarmonicDMD property) from_biotuner() (HarmonicInput class method), [1] from_biotuner_group() (HarmonicSequence class method), [1] from_biotuner_list() (HarmonicSequence class method), [1] (HarmonicSequenceAnalyzer class method) from_peaks() (HarmonicInput class method), [1] from_ratios() (HarmonicInput class method), [1] from_ratios_list() (HarmonicSequenceAnalyzer class method) G gallery() (in module biotuner.harmonic_geometry.plotting) gaussian_smooth_sigma (ResonanceConfig attribute), [1] gen_interval_to_stern_brocot() (in module biotuner.scale_construction) generate_surrogate() (in module biotuner.surrogates) generate_surrogate_data() (in module biotuner.surrogates) generator_interval_tuning() (in module biotuner.scale_construction) generator_to_stern_brocot_fractions() (in module biotuner.scale_construction) geom_type (GeometryData attribute), [1] geomean() (in module biotuner.resonance.combine) geometry_metrics() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.metrics) geometry_sequence() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.generative) GeometryData (class in biotuner.harmonic_geometry) (class in biotuner.harmonic_geometry.geometry_data) GeomType (in module biotuner.harmonic_geometry) get_attribute() (BiotunerGroup method) get_band_colors() (in module biotuner.plot_config) get_color_palette() (in module biotuner.plot_config) get_emd_colors() (in module biotuner.plot_config) get_harm_spectrum_metric_matrix() (harmonic_connectivity method) get_harmonic_ratio() (in module biotuner.harmonic_spectrum) get_histograms() (HarmonicSequenceAnalyzer method) get_plot_config() (in module biotuner.plot_config) get_tuning() (compute_biotuner method) get_tuning_scales() (BiotunerGroup method) gplv (HigherOrderResult attribute), [1] Granular (class in biotuner.harmonic_geometry) growth_rates_ (HarmonicDMD property) H harmmean() (in module biotuner.resonance.combine) harmonic_connectivity (class in biotuner.harmonic_connectivity) harmonic_entropy() (in module biotuner.harmonic_spectrum) (in module biotuner.scale_construction) harmonic_fit() (in module biotuner.peaks_extension) harmonic_fit_tuning (compute_biotuner.self attribute) harmonic_fit_tuning() (compute_biotuner method) harmonic_interference_field_2d() (in module biotuner.harmonic_geometry) harmonic_kernel (ResonanceConfig attribute), [1] harmonic_kernel_params (ResonanceConfig attribute), [1] harmonic_knot() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.geometry_3d) harmonic_point_cloud() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.geometry_3d) harmonic_recurrence() (in module biotuner.peaks_extraction) harmonic_spectrum_plot_avg_corr() (in module biotuner.resonance) (in module biotuner.resonance.plots) harmonic_spectrum_plot_freq_corr() (in module biotuner.resonance) (in module biotuner.resonance.plots) harmonic_spectrum_plot_trial_corr() (in module biotuner.resonance) (in module biotuner.resonance.plots) harmonic_surface() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.geometry_3d) harmonic_tuning (compute_biotuner.self attribute) harmonic_tuning() (compute_biotuner method) (in module biotuner.scale_construction) HarmonicDMD (class in biotuner.harmonic_sequence) HarmonicGrammar (class in biotuner.harmonic_sequence) HarmonicInput (class in biotuner.harmonic_geometry) (class in biotuner.harmonic_geometry.inputs) harmonicity_matrices() (in module biotuner.harmonic_spectrum) harmonicity_matrices_ (HarmonicSequenceAnalyzer property) harmonicity_matrix (CrossResonanceResult property) (ResonanceResult property), [1] HarmonicLatentSpace (class in biotuner.harmonic_sequence) HarmonicMarkov (class in biotuner.harmonic_sequence) harmonics() (in module biotuner.math_series) HarmonicSequence (class in biotuner.harmonic_geometry) (class in biotuner.harmonic_geometry.inputs) HarmonicSequenceAnalyzer (class in biotuner.harmonic_sequence) HarmonicTopology (class in biotuner.harmonic_sequence) harmonograph_3d() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.harmonograph) harmonograph_from_peaks() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.harmonograph) harmonograph_lateral() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.harmonograph) harmonograph_rotary() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.harmonograph) HE_scale (compute_biotuner.self attribute) HE_scale_cons (compute_biotuner.self attribute) high_order_transition_ (HarmonicMarkov property) higher_order (ResonanceResult attribute), [1] higher_order_coupling (ResonanceConfig attribute), [1] higher_order_params (ResonanceConfig attribute), [1] HigherOrderResult (class in biotuner.resonance) (class in biotuner.resonance.orchestrator) higuchi_fd() (in module biotuner.metrics) hilbert_bandpass_phase() (in module biotuner.resonance.phase_estimators) HilbertHuang1D() (in module biotuner.peaks_extraction) HilbertHuang1D_nopeaks() (in module biotuner.harmonic_connectivity) histogram_to_ratios() (in module biotuner.harmonic_sequence) histogram_to_scl() (in module biotuner.harmonic_sequence) histograms (HarmonicSequenceAnalyzer property) histograms_to_midi() (in module biotuner.harmonic_sequence) hofstadter_q() (in module biotuner.math_series) horogram_tree() (in module biotuner.scale_construction) horogram_tree_steps() (in module biotuner.scale_construction) hypocycloid() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.polygon_circular) I iaaft_surrogate() (in module biotuner.resonance.nulls) IF (compute_biotuner.self attribute) IFs (compute_biotuner.self attribute) ifs_harmonic() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.fractal) IMFs (compute_biotuner.self attribute), [1] info() (compute_biotuner method) integral_tenneyHeight() (in module biotuner.metrics) Interference (class in biotuner.harmonic_geometry) interference_field_2d() (in module biotuner.harmonic_geometry) intermediates (CrossResonanceResult attribute) (ResonanceResult attribute), [1] intermodulation_spectrum() (in module biotuner.peaks_extension) interpolate() (HarmonicLatentSpace method) (HarmonicSequence method), [1] interpolate_chords() (in module biotuner.harmonic_geometry) interpolate_pair() (WassersteinTrajectory method) interval_exponents() (in module biotuner.scale_construction) interval_to_radian() (in module biotuner.scale_construction) interval_vec_to_string() (in module biotuner.rhythm_construction) interval_vector() (in module biotuner.rhythm_construction) interval_vector_diagram() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.polygon_circular) invert_ratio() (in module biotuner.rhythm_construction) is_pairwise() (in module biotuner.resonance.registry) J jacobsthal() (in module biotuner.math_series) K kernel_harmsim() (in module biotuner.resonance.kernels_harmonic) kernel_subharm_tension() (in module biotuner.resonance.kernels_harmonic) L legacy_self_pair_subtract (ResonanceConfig attribute), [1] levenshtein() (HarmonicGrammar static method) linewidths (HarmonicInput attribute), [1] lissajous_2d() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.lissajous) lissajous_3d() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.lissajous) lissajous_compound() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.lissajous) lissajous_pairwise_grid() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.lissajous) lissajous_phase_drift() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.lissajous) lissajous_topology() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.lissajous) lissajous_tube() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.geometry_3d) list_strategies() (in module biotuner.resonance) (in module biotuner.resonance.registry) list_supported_kinds() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.metrics) listen_scale() (compute_biotuner method) load() (GeometryData class method), [1] log() (MetricsLog method), [1] log_geometry() (MetricsLog method), [1] log_sequence() (MetricsLog method), [1] lsystem_3d() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.geometry_3d) lsystem_from_ratios() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.generative) lucas() (in module biotuner.math_series) Lx (Box3D attribute) (Rectangular attribute) Ly (Box3D attribute) (Rectangular attribute) Lz (Box3D attribute) M make_axis_3d() (in module biotuner.harmonic_geometry.plotting) math_series (class in biotuner.math_series) measure_symmetry() (in module biotuner.scale_construction) Medium (class in biotuner.harmonic_geometry) mersenne() (in module biotuner.math_series) metadata (GeometryData attribute), [1] (HarmonicInput attribute), [1] method (HigherOrderResult attribute), [1] metric_3() (in module biotuner.metrics) metric_denom() (in module biotuner.metrics) metric_modulation_to_midi() (in module biotuner.rhythm_construction) MetricsLog (class in biotuner.harmonic_geometry) (class in biotuner.harmonic_geometry.metrics) min_combine() (in module biotuner.resonance.combine) modes_ (HarmonicDMD property) module biotuner.biotuner_group biotuner.biotuner_mne biotuner.biotuner_object biotuner.harmonic_connectivity biotuner.harmonic_geometry biotuner.harmonic_geometry.chladni biotuner.harmonic_geometry.fractal biotuner.harmonic_geometry.generative biotuner.harmonic_geometry.geometry_3d biotuner.harmonic_geometry.geometry_data biotuner.harmonic_geometry.harmonograph biotuner.harmonic_geometry.inputs biotuner.harmonic_geometry.lissajous biotuner.harmonic_geometry.metrics biotuner.harmonic_geometry.plotting biotuner.harmonic_geometry.polygon_circular biotuner.harmonic_sequence biotuner.harmonic_sequence_viz biotuner.harmonic_spectrum biotuner.math_series biotuner.metrics biotuner.peaks_extension biotuner.peaks_extraction biotuner.plot_config biotuner.plot_utils biotuner.resonance biotuner.resonance.combine biotuner.resonance.coupling biotuner.resonance.kernels_harmonic biotuner.resonance.kernels_ratio biotuner.resonance.nulls biotuner.resonance.orchestrator biotuner.resonance.phase_estimators biotuner.resonance.plots biotuner.resonance.registry biotuner.rhythm_construction biotuner.scale_construction biotuner.stats biotuner.surrogates biotuner.transitional_harmony MOS_metric_harmonic_mean() (in module biotuner.scale_construction) multi_consonance() (in module biotuner.peaks_extension) multi_oct_subdiv() (in module biotuner.scale_construction) N n_components() (HarmonicInput method), [1] n_frames() (HarmonicSequence method), [1] n_m_phase_locking() (in module biotuner.harmonic_connectivity) n_peaks (ResonanceConfig attribute), [1] n_series (BiotunerGroup attribute) n_sides (PolygonDomain attribute) nm_conditional_prob() (in module biotuner.resonance.coupling) nm_conditional_prob_canonical() (in module biotuner.resonance.coupling) nm_intertrial_plv() (in module biotuner.resonance) (in module biotuner.resonance.coupling) nm_multipliers() (in module biotuner.resonance) nm_phase_mi() (in module biotuner.resonance.coupling) nm_phase_mi_canonical() (in module biotuner.resonance.coupling) nm_pli() (in module biotuner.resonance.coupling) nm_pli_canonical() (in module biotuner.resonance.coupling) nm_plv() (in module biotuner.resonance.coupling) nm_plv_canonical() (in module biotuner.resonance.coupling) nm_rho_entropy() (in module biotuner.resonance.coupling) nm_rho_entropy_canonical() (in module biotuner.resonance.coupling) nm_rrci() (in module biotuner.resonance.coupling) nm_rrci_canonical() (in module biotuner.resonance.coupling) nm_wpli() (in module biotuner.resonance.coupling) nm_wpli_canonical() (in module biotuner.resonance.coupling) nm_wpli_complex() (in module biotuner.resonance.coupling) nm_wpli_complex_canonical() (in module biotuner.resonance.coupling) normalize (ResonanceConfig attribute), [1] normalize_metrics() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.metrics) normalized_amplitudes() (HarmonicInput method), [1] noverlap (ResonanceConfig attribute), [1] null_model (ResonanceConfig attribute), [1] O objects (BiotunerGroup attribute) oct_subdiv() (in module biotuner.scale_construction) oscillatory_modes() (HarmonicDMD method) P pac() (compute_biotuner method) pac_convention (ResonanceConfig attribute), [1] pac_frequencies() (in module biotuner.peaks_extraction) pac_mode() (in module biotuner.scale_construction) padovan() (in module biotuner.math_series) parameters (GeometryData attribute), [1] participation_spectrum (ResonanceResult attribute), [1] peaks (compute_biotuner.self attribute) (CrossResonanceResult attribute) (HarmonicInput attribute), [1] (ResonanceResult attribute), [1] peaks_extension() (compute_biotuner method) peaks_extraction() (compute_biotuner method) peaks_metrics (compute_biotuner.self attribute) peaks_ratios (compute_biotuner.self attribute) peaks_ratios_cons (compute_biotuner.self attribute) peaks_ratios_harm (compute_biotuner.self attribute), [1] peaks_ratios_inc (compute_biotuner.self attribute), [1] peaks_ratios_inc_bound (compute_biotuner.self attribute) peaks_ratios_inc_fit (compute_biotuner.self attribute), [1] peaks_to_harmsim() (in module biotuner.metrics) pell() (in module biotuner.math_series) persistence (ResonanceConfig attribute), [1] persistence_diagram_ (HarmonicTopology property) persistence_params (ResonanceConfig attribute), [1] phase_coupling_matrix (CrossResonanceResult property) (ResonanceResult property), [1] phase_estimator (ResonanceConfig attribute), [1] phase_estimator_params (ResonanceConfig attribute), [1] phase_randomize_surrogate() (in module biotuner.resonance.nulls) phases (HarmonicInput attribute), [1] phi_convergent_point() (in module biotuner.scale_construction) Pipeline (class in biotuner.harmonic_geometry) PlasmaLattice (class in biotuner.harmonic_geometry) plot_cents_ruler() (math_series method) plot_common_intervals() (BiotunerGroup method) plot_comparison_flux() (in module biotuner.harmonic_sequence_viz) plot_comparison_latent() (in module biotuner.harmonic_sequence_viz) plot_comparison_summary() (in module biotuner.harmonic_sequence_viz) plot_conn_matrix() (harmonic_connectivity method) plot_dmd_spectrum() (in module biotuner.harmonic_sequence_viz) plot_emd_peaks() (in module biotuner.plot_utils) plot_fit_landscape() (math_series method) plot_geometry() (in module biotuner.harmonic_geometry.plotting) plot_grammar_interval_heatmap() (in module biotuner.harmonic_sequence_viz) plot_group_peaks() (BiotunerGroup method) plot_harmonic_fit() (compute_biotuner method) (in module biotuner.plot_utils) plot_harmonic_fit_matrix() (compute_biotuner method) plot_harmonic_fit_network() (compute_biotuner method) plot_harmonic_fit_positions() (compute_biotuner method) plot_harmonic_peaks() (in module biotuner.plot_utils) plot_harmonic_position_mappings() (compute_biotuner method) (in module biotuner.plot_utils) plot_histogram_heatmap() (in module biotuner.harmonic_sequence_viz) plot_IMF_correlation_matrix() (harmonic_connectivity method) plot_interval_histogram() (BiotunerGroup method) plot_latent_trajectory() (in module biotuner.harmonic_sequence_viz) plot_markov_matrix() (in module biotuner.harmonic_sequence_viz) plot_metric_distribution() (BiotunerGroup method) plot_metric_matrix() (BiotunerGroup method) plot_metric_radar() (in module biotuner.harmonic_geometry.plotting) plot_metric_trajectory() (in module biotuner.harmonic_geometry.plotting) plot_octave_wheel() (math_series method) plot_peak_distribution() (BiotunerGroup method) plot_peaks() (compute_biotuner method) (in module biotuner.plot_utils) plot_peaks_amplitude() (compute_biotuner method) plot_peaks_matrix() (compute_biotuner method) plot_peaks_spectrum() (compute_biotuner method) plot_peaks_summary() (compute_biotuner method) plot_phase_shift_evolution() (in module biotuner.rhythm_construction) plot_polyrhythm_coincidence() (in module biotuner.rhythm_construction) plot_polyrhythm_coincidence_matrix() (in module biotuner.rhythm_construction) plot_polyrhythm_phase_wheel() (in module biotuner.rhythm_construction) plot_polyrhythm_piano_roll() (in module biotuner.rhythm_construction) plot_polyrhythm_score() (in module biotuner.rhythm_construction) plot_proportions() (math_series method) plot_psd_peaks() (in module biotuner.plot_utils) plot_ratio_pairs() (math_series method) plot_rhythm_evolution() (in module biotuner.rhythm_construction) plot_scale_size_distribution() (BiotunerGroup method) plot_scenario_overview() (in module biotuner.harmonic_sequence_viz) plot_second_order_polyrhythm() (in module biotuner.rhythm_construction) plot_series_comb() (math_series method) plot_simplicity_bubbles() (math_series method) plot_stats_comparison() (in module biotuner.stats) plot_surrogate_distributions() (in module biotuner.surrogates) plot_tda_grammar_grid() (in module biotuner.harmonic_sequence_viz) plot_topology_barcode() (in module biotuner.harmonic_sequence_viz) plot_tuning() (compute_biotuner method) (in module biotuner.plot_utils) plot_tuning_comparison() (BiotunerGroup method) plot_tuning_consonance_profile() (compute_biotuner method) plot_tuning_curve() (compute_biotuner method) plot_tuning_dissonance() (in module biotuner.plot_utils) plot_tuning_entropy() (in module biotuner.plot_utils) plot_tuning_interval_table() (compute_biotuner method) plot_tuning_intervals() (compute_biotuner method) plot_tuning_matrix() (compute_biotuner method) plot_tuning_scale() (compute_biotuner method) plot_tuning_summary() (compute_biotuner method) plot_wasserstein_flux() (in module biotuner.harmonic_sequence_viz) plot_wasserstein_matrix() (in module biotuner.harmonic_sequence_viz) polycoherence() (in module biotuner.peaks_extraction) polygon_chord_pattern() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.polygon_circular) PolygonDomain (class in biotuner.harmonic_geometry) polyrhythm_continuous_to_midi() (in module biotuner.rhythm_construction) polyrhythm_dump_osc_patterns() (in module biotuner.rhythm_construction) polyrhythm_send_osc() (in module biotuner.rhythm_construction) polyrhythm_to_midi() (in module biotuner.rhythm_construction) polyrhythm_to_osc_score() (in module biotuner.rhythm_construction) polyrhythms (HigherOrderResult attribute), [1] polyspectrum_frequencies() (in module biotuner.peaks_extraction) precision_hz (ResonanceConfig attribute), [1] predict_next_proba() (HarmonicMarkov method) product() (in module biotuner.resonance.combine) project_higher_order_to_bins (ResonanceConfig attribute), [1] projection_op (ResonanceConfig attribute), [1] psd (compute_biotuner.self attribute) (HarmonicInput attribute), [1] psd_method (ResonanceConfig attribute), [1] psd_normalization (ResonanceConfig attribute), [1] Q quasicrystal_field_2d() (in module biotuner.harmonic_geometry) R R (Circular attribute) (Sphere attribute) radius (PolygonDomain attribute) ratio_kernel (ResonanceConfig attribute), [1] ratio_kernel_params (ResonanceConfig attribute), [1] ratios (HarmonicInput attribute), [1] (math_series attribute) ratios2harmsim() (in module biotuner.metrics) ratios_alternates (HarmonicInput attribute), [1] ratios_extension() (compute_biotuner method) ratios_source (HarmonicInput attribute), [1] ratios_to_modes() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.chladni) ratios_to_modes_lm() (in module biotuner.harmonic_geometry) ReactionDiffusion (class in biotuner.harmonic_geometry) reconstruct() (HarmonicDMD method) reconstruction_error_ (HarmonicLatentSpace property) Rectangular (class in biotuner.harmonic_geometry) recursive_polygon() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.generative) recursive_polyhedron() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.geometry_3d) reduce_matrix_to_spectrum() (in module biotuner.resonance.coupling) register_combine_rule() (in module biotuner.resonance.registry) register_coupling_metric() (in module biotuner.resonance.registry) register_harmonic_kernel() (in module biotuner.resonance.registry) register_persistence() (in module biotuner.resonance.registry) register_phase_estimator() (in module biotuner.resonance.registry) register_ratio_kernel() (in module biotuner.resonance.registry) register_surrogate_type() (in module biotuner.resonance.registry) remove_aperiodic (ResonanceConfig attribute), [1] rescale_factors_after_detrend (ResonanceConfig attribute), [1] reset_style() (in module biotuner.plot_config) resonance_spectrum (CrossResonanceResult attribute) (ResonanceResult attribute), [1] resonance_spectrum_z (ResonanceResult attribute), [1] ResonanceConfig (class in biotuner.resonance) (class in biotuner.resonance.orchestrator) ResonanceResult (class in biotuner.resonance) (class in biotuner.resonance.orchestrator) respond() (Acoustic method) (ClosedSurface method) (Crystallization method) (Elastic method) (Faraday method) (Granular method) (Interference method) (Medium method) (Pipeline method) (PlasmaLattice method) (ReactionDiffusion method) (RigidPlate method) (Streaming method) (Tracer method) results (BiotunerGroup attribute) results_to_dataframe() (in module biotuner.resonance) (in module biotuner.resonance.plots) return_intermediates (ResonanceConfig attribute), [1] rhythm_construction() (compute_biotuner method) rhythmic_ratio_coupling_imaginary() (in module biotuner.harmonic_connectivity) RigidPlate (class in biotuner.harmonic_geometry) rose_curve() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.polygon_circular) rotation_strip() (in module biotuner.harmonic_geometry.plotting) rows (MetricsLog attribute), [1] S save() (GeometryData method), [1] save_figure() (in module biotuner.harmonic_geometry.plotting) scalar_metrics (HarmonicSequenceAnalyzer property) scale2euclid() (in module biotuner.rhythm_construction) scale2polyrhythm() (in module biotuner.rhythm_construction) scale2polyrhythm_continuous() (in module biotuner.rhythm_construction) scale2polyrhythm_harmonic() (in module biotuner.rhythm_construction) scale2polyrhythm_iso() (in module biotuner.rhythm_construction) scale_cents() (math_series method) scale_metrics (compute_biotuner.self attribute), [1] second_order_polyrhythm() (in module biotuner.rhythm_construction) second_order_polyrhythm_to_midi() (in module biotuner.rhythm_construction) self_similar_tuning() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.generative) sequence_metrics() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.metrics) SERIES_FUNCS (in module biotuner.math_series) series_mode() (math_series method) series_ratio_pairs() (in module biotuner.math_series) series_scale() (math_series method) series_scores (math_series attribute) session_fingerprint() (HarmonicTopology method) set_biotuner_style() (in module biotuner.plot_config) shape (BiotunerGroup attribute) silhouette_scores_ (HarmonicMarkov property) single_spherical_harmonic() (in module biotuner.harmonic_geometry) singular_vectors (HigherOrderResult attribute), [1] SingularSpectrumAnalysis (class in biotuner.peaks_extraction) smoothness (ResonanceConfig attribute), [1] sms_partials() (in module biotuner.peaks_extraction) spectral_entropy() (in module biotuner.metrics) spectral_flatness (HarmonicInput attribute), [1] spectral_flatness() (in module biotuner.metrics) spectral_spread() (in module biotuner.metrics) spectro_chords (compute_biotuner.self attribute), [1] spectro_EMD (compute_biotuner.self attribute), [1] spectrum_complexity() (in module biotuner.metrics) spectrum_method (HarmonicInput attribute), [1] Sphere (class in biotuner.harmonic_geometry) spherical_harmonic_field() (in module biotuner.harmonic_geometry) spherical_harmonic_from_input() (in module biotuner.harmonic_geometry) spherical_harmonic_mesh() (in module biotuner.harmonic_geometry) spherical_harmonic_temporal() (in module biotuner.harmonic_geometry) SSA_EEG() (in module biotuner.peaks_extraction) standing_wave_lattice_2d() (in module biotuner.harmonic_geometry) star_polygon() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.polygon_circular) state_labels_ (HarmonicMarkov property) steady_state_ (HarmonicMarkov property) Stern_Brocot() (in module biotuner.scale_construction) stern_brocot_to_generator_interval() (in module biotuner.scale_construction) stern_brocot_tree() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.fractal) stft_phase() (in module biotuner.resonance.phase_estimators) Streaming (class in biotuner.harmonic_geometry) subharmonic_tree() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.fractal) subharmonics() (in module biotuner.math_series) sum_distinct_intervals() (in module biotuner.metrics) sum_p_q() (in module biotuner.metrics) sum_p_q_for_all_intervals() (in module biotuner.metrics) sum_q_for_all_intervals() (in module biotuner.metrics) summaries (CrossResonanceResult attribute) (HigherOrderResult attribute), [1] (ResonanceResult attribute), [1] summary() (BiotunerGroup method) (HarmonicSequenceAnalyzer method) (math_series method) surrogate_group() (in module biotuner.surrogates) surrogate_mean (ResonanceResult attribute), [1] surrogate_std (ResonanceResult attribute), [1] sweep_strip() (in module biotuner.harmonic_geometry.plotting) T takens_embedding_ (HarmonicTopology property) temporal_correlation_fdr() (in module biotuner.harmonic_connectivity) tenneyHeight() (in module biotuner.metrics) time_resolved_harmonicity (compute_biotuner.self attribute) time_resolved_harmonicity() (compute_biotuner method) time_shuffle_surrogate() (in module biotuner.resonance.nulls) timepoint_consonance() (in module biotuner.metrics) times (HarmonicSequence attribute), [1] times_table_circle() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.polygon_circular) times_table_from_input() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.polygon_circular) title_ax() (in module biotuner.harmonic_geometry.plotting) to_csv() (MetricsLog method), [1] to_dict() (MetricsLog method), [1] to_harmonic_input() (compute_biotuner method) to_json() (MetricsLog method), [1] to_midi() (HarmonicSequenceAnalyzer method) to_peaks() (HarmonicInput method), [1] to_ratios() (HarmonicInput method), [1] to_scl() (HarmonicSequenceAnalyzer method) top_motifs() (HarmonicGrammar method) top_ngrams() (HarmonicGrammar method) Tracer (class in biotuner.harmonic_geometry) trajectory() (HarmonicLatentSpace method) transform() (SingularSpectrumAnalysis method) transition_entropy_ (HarmonicGrammar property) (HarmonicMarkov property) transition_matrix_ (HarmonicMarkov property) transition_proba() (HarmonicGrammar method) transitional_connectivity() (harmonic_connectivity method) transitional_harmony (class in biotuner.transitional_harmony) triangular() (in module biotuner.math_series) triplets (HigherOrderResult attribute), [1] ttest_groups() (in module biotuner.stats) TUNING_ATTRS (in module biotuner.harmonic_sequence) tuning_circle() (in module biotuner.harmonic_geometry) (in module biotuner.harmonic_geometry.polygon_circular) tuning_cons_matrix() (in module biotuner.metrics) tuning_from_raw() (in module biotuner.biotuner_object) tuning_MOS_info() (in module biotuner.scale_construction) tuning_range_to_MOS() (in module biotuner.scale_construction) tuning_reduction() (in module biotuner.scale_construction) TUNING_SOURCES (in module biotuner.biotuner_object) tuning_summary() (BiotunerGroup method) tuning_to_metrics() (in module biotuner.metrics) tuning_to_radians() (in module biotuner.scale_construction) U UnivariateTransformerMixin (class in biotuner.peaks_extraction) update_plot_config() (in module biotuner.plot_config) V VALID_REPRESENTATIONS (HarmonicSequenceAnalyzer attribute) validate() (HarmonicInput method), [1] visualize_rhythms() (in module biotuner.rhythm_construction) vocabulary_ (HarmonicGrammar property) voices_to_midi() (in module biotuner.rhythm_construction) vortex_field_2d() (in module biotuner.harmonic_geometry) W WassersteinTrajectory (class in biotuner.harmonic_sequence) weighted_log() (in module biotuner.resonance.combine) weights (GeometryData attribute), [1] with_surrogate_null() (in module biotuner.resonance) (in module biotuner.resonance.nulls) wPLI_crossfreq() (in module biotuner.harmonic_connectivity) wPLI_multiband() (in module biotuner.harmonic_connectivity)
